MindGraphDocs

Concepts

Core concepts behind MindGraph's structured semantic memory model.

Layers

MindGraph organizes knowledge into six cognitive layers that mirror how agents reason, plus an optional operational ontology layer for workspace-specific business objects (Layer 7). Each layer has its own set of node types, and queries can target a single layer or traverse across all of them.

LayerPurposeNode Types
RealityRaw observations & sourcesSource, Snippet, Person, Organization, Nation, Event, Place, Concept, Entity, Observation, Document, Chunk
EpistemicReasoning & knowledgeClaim, Evidence, Warrant, Argument, Hypothesis, Theory, Paradigm, Anomaly, Method, Experiment, Assumption, Question, OpenQuestion, Analogy, Pattern, Mechanism, Model, ModelEvaluation, InferenceChain, SensitivityAnalysis, ReasoningStrategy, Theorem, Equation
IntentGoals & decisionsGoal, Project, Decision, Option, Constraint, Milestone
ActionAffordances & workflowsAffordance, Flow, FlowStep, Control, RiskAssessment
MemoryPersistence & recallSession, Trace, Summary, Lesson, Preference, MemoryPolicy, Journal, Article
AgentControl planeAgent, Task, Plan, PlanStep, Approval, Policy, Execution, SafetyBudget, Space, PolicyDecision
Ontology (L7)Operational domain objectsA semantic contract: typed domain objects (Customer, Supplier, Patient) bound to your SQL database or extracted from documents, fused onto one object — see Operational Ontology

Node Types (64)

Every node has a type that determines its layer and the shape of its properties. The 64 built-in types cover the most common knowledge structures for AI agents. Custom types are also supported via the Custom variant — pass any string as the node_type field in API requests. Custom types are the backing storage for Layer 7 (Operational Ontology) domain objects.

Every node carries universal metadata: uid, label, summary, confidence (0.0-1.0), salience (0.0-1.0), privacy, version, and timestamps.

Edge Types (108)

Edges connect nodes with typed relationships. Each edge type belongs to a category and carries its own property schema.

CategoryEdge Types
Structural (7)ExtractedFrom, RepresentsEntity, PartOf, HasPart, InstanceOf, Contains, ChunkOf
Epistemic (32)Supports, Refutes, Justifies, HasPremise, HasConclusion, HasWarrant, Rebuts, Undercuts, Assumes, Tests, Produces, UsesMethod, Addresses, Generates, Extends, Supersedes, Contradicts, AnomalousTo, AnalogousTo, Instantiates, TransfersTo, Evaluates, Outperforms, FailsOn, HasChainStep, PropagatesUncertaintyTo, SensitiveTo, RobustAcross, Describes, DerivedFrom, ReliesOn, ProvenBy
Provenance (5)ProposedBy, AuthoredBy, CitedBy, BelievedBy, ConsensusIn
Intent (11)DecomposesInto, MotivatedBy, HasOption, DecidedOn, DecidedBy, ConstrainedBy, Blocks, Informs, RelevantTo, DependsOn, PartOfProject
Action (5)AvailableOn, ComposedOf, StepUses, RiskAssessedBy, Controls
Memory (9)CapturedIn, TraceEntry, Summarizes, LearnedFrom, AppliesTo, Recalls, GovernedBy, SummarizesDocument, Covers
Agent (14)AssignedTo, PlannedBy, HasStep, Targets, RequiresApproval, ExecutedBy, ExecutionOf, ProducesNode, GovernedByPolicy, BudgetFor, AuthorizedFor, Invokes, Fired, DecisionFor
Temporal (1)Follows
Curation (2)Invalidates, PossibleDuplicate
Entity Relations (22)WorksFor, AffiliatedWith, About, KnownBy, MemberOf, LeaderOf, FoundedBy, BasedIn, CitizenOf, LocatedIn, OccurredAt, ParticipatedIn, AlliedWith, RivalOf, ReportsTo, Endorses, Criticizes, RelatedTo, ExpertIn, OperatesIn, Strengthens, Challenges

MindGraph supports three search modes:

  • Full-text search — BM25 scoring over node labels and summaries. Filter by node type and layer.
  • Semantic/vector search — Embedding-powered cosine similarity search via HNSW indices. Requires embeddings to be configured and populated.
  • Hybrid search — Combines BM25 and vector search with reciprocal rank fusion for best results.

Traversal

Graph traversal uses an optimized 2-query BFS: one query fetches all live edges, BFS runs in-memory, then a second query batch-fetches node metadata. This reduces traversal from O(N) database queries to exactly 2.

  • Reasoning chain — Follow epistemic edges (Supports, Refutes, etc.) from a starting node.
  • Neighborhood — BFS in any direction up to a given depth.
  • Path finding — Find the shortest path between two nodes.
  • Subgraph extraction — Get all reachable nodes and their interconnecting edges.

Versioning

MnesticDB stores knowledge bitemporally. Valid time records when a fact was true in the world; transaction time records when MindGraph learned or changed it. Every mutation creates a new append-only version, so you can inspect history, reconstruct what the system knew at an earlier point, and distinguish a corrected fact from a newly discovered fact. Each version records who made the change (changed_by) and why (reason).

Salience & Temporal Decay

Every node has a salience score (0.0-1.0) that represents contextual relevance. Salience decays over time using an exponential half-life model — just like human memory, recent knowledge surfaces first in search results.

Use POST /decay to apply decay, and optionally auto-tombstone nodes that fall below a salience threshold.

Multi-Agent Support

MindGraph resolves the acting principal from the authenticated credential; callers cannot claim a different identity by changing a request field. Access is evaluated before retrieval or mutation, and provenance records the human or agent responsible for each change.

  • Spaces — Grant read or write access, with optional classification ceilings.
  • Projects — Assign viewer, editor, or agent roles to a scoped source corpus.
  • Tool grants — Explicitly control which native or MCP tools an agent may invoke.
  • Revocation — Access changes apply on the next request; sessions do not retain stale authority.
  • Provenance — Version history retains changed_by and delegated execution context.

See Governance & Access for the full authorization model.

Entity Resolution

MindGraph includes built-in entity resolution via an alias table. Register aliases for entities, resolve text to canonical UIDs (exact or fuzzy match), and merge duplicate entities — edges are automatically retargeted and the duplicate is tombstoned.

Note:For every field available in each node type's props object, see the Node Props Reference in the API Reference. For endpoint usage patterns, see Agent Memory Patterns.